Scientific Publications 

• Sharma A, Dutta P, Sharma M, Rajput NK, Dodiya B, Georrge JJ, Kholia T; OSDD Consortium, Bhardwaj A. BioPhytMol: a drug discovery community resource on anti-mycobacterial phytomolecules and plant extracts. J Cheminform. 2014 Oct 11;6(1):46. eCollection 2014. PMID: 25360160

• Vashisht R, Bhat BG, Kushwaha, Bhardwaj A, OSDD Consortium, Brahmachari SK. Systems level mapping of metabolic complexity in Mycobacterium tuberculosis to identify high-value drug targets.  Journal of Translational Medicine 2014, 12:263. PMID: 25304862

• Maganti L; OSDD Consortium, Ghoshal N. 3D-QSAR studies and shape based virtual screening for identification of novel hits to inhibit MbtA in Mycobacterium tuberculosis. J Biomol Struct Dyn. 2014 Jan 13.PubMed PMID: 24417439.

• Vashisht R, Bhardwaj A, OSDD Consortium, Brahmachari SK.   Social networks to biological networks: systems biology of Mycobacterium tuberculosis. Mol Biosyst. 2013 Jul 4; 9(7):1584-93. doi: 10.1039/c3mb25546h. Epub 2013 Apr 29. PubMed PMID: 23629487.

• Jamal S, Periwal V; Open Source Drug Discovery Consortium, Scaria V. Predictive modeling of anti-malarial molecules inhibiting apicoplast formation. BMC Bioinformatics. 2013 Feb 15;14(1):55. PubMed PMID: 23419172.

• Seal A, Yogeeswari P, Sriram D, Consortium O, Wild DJ. Enhanced ranking of PknB Inhibitors using data fusion methods. J Cheminform. 2013 Jan 14;5(1):2.PubMed PMID: 23317154.

• Vashisht R, Mondal AK, Jain A, Shah A, Vishnoi P, Priyadarshini P, Bhattacharyya K, Rohira H, Bhat AG, Passi A, Mukherjee K, Choudhary KS, Kumar V, Arora A, Munusamy P, Subramanian A, Venkatachalam A, S G, Raj S, Chitra V, Verma K, Zaheer S, J B, Gurusamy M, Razeeth M, Raja I, Thandapani M, Mevada V, Soni R, Rana S, Ramanna GM, Raghavan S, Subramanya SN, Kholia T, Patel R, Bhavnani V, Chiranjeevi L, Sengupta S, Singh PK, Atray N, Gandhi S, Avasthi TS, Nisthar S, Anurag M, Sharma P, Hasija Y, Dash D, Sharma A, Scaria V, Thomas Z; OSDD Consortium, Chandra N, Brahmachari SK, Bhardwaj A. Crowd Sourcing a New Paradigm for Interactome Driven Drug Target Identification in Mycobacterium tuberculosis. PLoS One. 2012;7(7):e39808. Epub 2012 Jul 11. PubMed PMID: 22808064; PubMed Central PMCID: PMC3395720. 

• Seal A, Passi A, Jaleel UCA, Wild D and OSDD Consortium; In-silico Predictive Mutagenicity Model Generation Using Supervised Learning Approaches, Journal of Cheminformatics, 15 May 2012, 4:10 doi:10.1186/1758-2946-4-10

• Periwal V, Kishtapuram S, Open Source Drug Discovery Consortium, Scaria V; Computational models for in-vitro anti-tubercular activity ofmolecules based on high-throughput chemical biology screening datasets,  BMC Pharmacology.2012 March 12:1 doi:10.1186/1471-2210-12-1

• Singh H, Chauhan JS, Gromiha MM; Open Source Drug Discovery Consortium, Raghava GP. ccPDB: compilation and creation of data sets from Protein Data Bank. Nucleic Acids Res. 2012 Jan;40(Database issue):D486-9. Epub 2011 Dec 1. PubMed PMID: 22139939; PubMed Central PMCID: PMC3245168.

• Periwal V, K.R Jinuraj, Open Source Drug Discovery Consortium, Jaleel UCA, Scaria V. Predictive models for anti-tubercular molecules using machine learning on high throughput biological screening data sets. BMC  Research Notes. 2011 Nov 18;4(1):504. PubMed PMID: 22099929

• Anand P, Sankaran S, Mukherjee S, Yeturu K, Laskowski R, Bhardwaj A, Bhagavat R; OSDD Consortium, Brahmachari SK, Chandra N. Structural Annotation of Mycobacterium tuberculosis Proteome. PLoS One. 2011;6(10):e27044. Epub 2011 Oct 31. PubMed PMID: 22073123; PubMed Central PMCID: PMC3205055.

• Singla D, Anurag M, Dash D, Raghava GP. A web server for predicting inhibitors against bacterial target GlmU protein. BMC Pharmacol. 2011 Jul 6;11:5. PubMed PMID: 21733180; PubMed Central PMCID: PMC3146400.

• Bhardwaj A, Scaria V, Raghava GP, Lynn AM, Chandra N, Banerjee S, Raghunandanan MV, Pandey V, Taneja B, Yadav J, Dash D, Bhattacharya J, Misra A, Kumar A, Ramachandran S, Thomas Z, Open Source Drug Discovery Consortium, Brahmachari SK. Open source drug discovery- A new paradigm of collaborative research in tuberculosis drug development. Tuberculosis (Edinb). 2011 Sep;91(5):479-86. Epub 2011 Jul 22. PubMed PMID: 21782516.

• Maganti L, Das SK, Mascarenhas NM, Ghoshal N.Deciphering the Structural Requirements of Nucleoside Bisubstrate Analogues for Inhibition of MbtA in Mycobacterium tuberculosis: A FB-QSAR Study and Combinatorial Library Generation for Identifying Potential Hits. Molecular Informatics, October 2011, Volume 30, Issue 10, pages 863–872

• Bhardwaj A, Scaria v, Patra D, Open Source Drug Discovery Consortium. Open source drug discovery: a global collaborative drug discovery model for tuberculosis. Science and culture, January-February, 2011, vol. 77, nos. 1–2, 22-26.

• Bhat AG, Vashisht R, Chandra N. Modeling metabolic adjustment in Mycobacterium tuberculosis upon treatment with isoniazid. Syst Synth Biol. 2010 Dec;4(4):299-309. Epub 2011 Feb 26. PubMed PMID: 22132057; PubMed Central PMCID: PMC3065594.

•  Mishra NK, Agarwal S, Raghava GP. Prediction of cytochrome P450 isoform responsible for metabolizing a drug molecule. BMC Pharmacol. 2010 Jul 16;10:8. PubMed PMID: 20637097; PubMed Central PMCID: PMC2912882.

•  Mathew R, Kruthiventi AK, Prasad JV, Kumar SP, Srinu G, Chatterji D. Inhibition of mycobacterial growth by plumbagin derivatives. Chem Biol Drug Des. 2010 Jul;76(1):34-42. Epub 2010 May 4. PubMed PMID: 20456370.

•  Garg A, Tewari R, Raghava GP. KiDoQ: using docking based energy scores to develop ligand based model for predicting antibacterials. BMC Bioinformatics. 2010 Mar 11;11:125. PubMed PMID: 20222969; PubMed Central PMCID: PMC2841597

•  Bhardwaj A, Bhartiya D, Kumar N; Open Source Drug Discovery Consortium, Scaria V. TBrowse: an integrative genomics map of Mycobacterium tuberculosis. Tuberculosis (Edinb). 2009 Sep;89(5):386-7. Epub 2009 Aug 14. PubMed PMID: 19683474.

•  Sharma S, Kumar M, Sharma S, Nargotra A, Koul S, Khan IA. Piperine as an inhibitor of Rv1258c, a putative multidrug efflux pump of Mycobacterium tuberculosis. J Antimicrob Chemother. 2010 Aug;65(8):1694-701. Epub 2010 Jun 4. PubMed PMID: 20525733.